Microarray Lab
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Saved by 2 people (0 private), first by anonymouse user on 2007-06-02
- Dubhelix on 2008-12-03 - Tags microarray , analysis , tool , probefilter
- Vmorozov on 2007-06-02 - Tags affymetrix , cdf , probe
Public Sticky notes
Oligonucleotide probes on GeneChips
are reorganized based on the
latest genome and
transcriptome information. In addition to custom CDF files for different
target definitions, GeneChips and data analysis platforms, we also
provide 1) a
probe mapping file that matches individual probes in the custom CDF
file and the corresponding Affymetrix CDF file; 2) a
grouping file that can be used to find all targets (exons,
transcripts) represented by the same probe set. The grouping file also contains the
probe set spanning range on genome or transcripts to facilitate RT-PCR primer design.
Highlighted by vmorozov
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